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Step 2 - Analysis of raw data by other Methods
Three laboratories kindly provided free Excel sheets for the analysis of several probe mixes. Commercial software to analyse MLPA data is available from the two companies below.
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[http://www.mlpa.com/coffalyser]
[http://www.ngrl.org.uk/Manchester/Publications.htm]
[http://www.mlpa.com/coffalyser]
MRC Coffalyser - free download The Excel-based program developed by MRC-Holland can be downloaded for free.
[http://www.ngrl.org.uk/Manchester/Informaticspubs.htm]
NGRL, Manchester analysis sheets - free download Spreadsheets (Excel 2000) for many MLPA kits, intented to simplify and streamline the process of analysing complex MLPA data.
[http://www.chromosomelab.dk/mlpa/download.html]
[http://www.chromosomelab.dk/mlpa/download.html]
[http://www.chromosomelab.dk/mlpa/download.html]
Chrom. Lab Rigshospitalet Copenhagen - free download Software for the analysis of P023, P036(B), P064, P069 and P095 MLPA kits. Moreover, the “ABI-export tabular “ converts F*.* files (raw ABI run files) into TXT files and is a handy tool for Genescan 3.0-7 users.
[http://www.softgenetics.com]
[http://www.softgenetics.com]
[http://www.softgenetics.com]
Softgenetics MLPA software - commercially available GeneMarker® for MLPA converts data from any sequencing system, offers two normalization and analysis methods, and includes a customizable Patient Report.
[http://www.jsi-medisys.de]
[http://www.jsi-medisys.de]
JSI Medical Systems MLPA sofware - commercially available JSI Medical Sysytems is compatible with all sequencing systems, works with raw data files and can define different analysis methods for each MLPA kit.
[http://www.ngrl.org.uk/Manchester/Informaticspubs.htm]
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